No, IRS is only looking for total income on Sch C to match up with the total income on the 1099NECs that have been reported to them by the payers, they don't cross match the actual 1099NEC forms to the return, just the total dollar amounts.  Ive never once in 25 years entered a 1099MISC/NEC into the program, I always input total income on Sch C.

Or just ignore the diagnostic loop and leave the return as is. If you dont see any more red marks in the Forms in Use list, you should be good to go.