I'm having real trouble following your post but maybe that's because it's early and I haven't had coffee yet.  With that said, why are you amending?  Because of the adjustments made to the prior year?  

I would input the information on the 1098 T exactly as they are presented and allow the ProSeries program to guide you from there.  Just "listen" to what the program does and see if everything can be handled on this years return.  See how it treats the information you enter.