Yep.  I'm that preparer.  I preared the PA20S for the S Corp.  It generated as R-K1.  The section 179 is shown on line 16 of the RK-1, but Proseries doesn't pull it in anywhere. It's just pulling line 1 of the RK-1, which is full business income, and putting that on line 4 of PA-40.  Not giving any deduction for 179.